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BaseInfo

ncRNA ID novel_bna_miR559
Species Brassica napus
Class miRNA
Genome position ChrC3:12310179-12310313 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537604
Length 27
Mature sequence(if miRNA) 1 - AAAACCCUAAACCCUAAACCCUAAAUC - 27
Stem-loop(if miRNA) --A          C C     C         AAACCC                 AG  UU  --U   U
   AAACCCUAAA C UAAAC CUAAAUCCU      UAAACCCUAAACCCUUG  UG  UU   GAU U
   |||||||||| | ||||| |||||||||      |||||||||||||||||  ||  ||   ||| A
   UUUGGGAUUU G AUUUG GAUUUAGGA      AUUUGGGAUUUGGGAAC  AU  AG   UUG G
CAA          A U     A         --AUCC                 CU  UU  UAU   A
Stem-loop sequence AAAACCCUAAACCCUAAACCCUAAAUCCUAAACCCUAAACCCUAAACCCUUGAGUGUUUUUGAUUUAGAGUUUAUGAUUUAUCCAAGGGUUUAGGGUUUACCUAAGGAUUUAGAGUUUAUGAUUUAGGGUUUAAC