ncRNA ID | novel_bna_miR559 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:12310179-12310313 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604 |
Length | 27 |
Mature sequence(if miRNA) | 1 - AAAACCCUAAACCCUAAACCCUAAAUC - 27 |
Stem-loop(if miRNA) |
--A          C C     C         AAACCC                 AG  UU  --U   U    AAACCCUAAA C UAAAC CUAAAUCCU      UAAACCCUAAACCCUUG  UG  UU   GAU U    |||||||||| | ||||| |||||||||      |||||||||||||||||  ||  ||   ||| A    UUUGGGAUUU G AUUUG GAUUUAGGA      AUUUGGGAUUUGGGAAC  AU  AG   UUG G CAA          A U     A         --AUCC                 CU  UU  UAU   A |
Stem-loop sequence | AAAACCCUAAACCCUAAACCCUAAAUCCUAAACCCUAAACCCUAAACCCUUGAGUGUUUUUGAUUUAGAGUUUAUGAUUUAUCCAAGGGUUUAGGGUUUACCUAAGGAUUUAGAGUUUAUGAUUUAGGGUUUAAC |