ncRNA ID | novel_bna_miR555 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC2:37181308-37181448 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604;SRR537612;SRR537633;SRR537657;SRR537857 |
Length | 27 |
Mature sequence(if miRNA) | 1 - UCUUAGCGUAAUAUAAGAUACGGUAUC - 27 |
Stem-loop(if miRNA) |
--             U          A     AC             A          ACCUCUUAUAUC   UCUUAGCGUAAUA AAGAUACGGU UCUUA  UUUUAAUUAAAAA ACUAAGAGAC            U   ||||||||||||| |||||||||| |||||  ||||||||||||| ||||||||||            C   AGAAUCGCAUUAU UUCUAUGCCA AGAAU  AAAAUUGAUUUUU UGAUUCUCUG            U UA             C          G     CU             G          CAAAAAAUUUAU |
Stem-loop sequence | UCUUAGCGUAAUAUAAGAUACGGUAUCUUAACUUUUAAUUAAAAAAACUAAGAGACACCUCUUAUAUCUCUUAUUUAAAAAACGUCUCUUAGUGUUUUUAGUUAAAAUCUAAGAGACCGUAUCUUCUAUUACGCUAAGAAU |