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BaseInfo

ncRNA ID novel_bna_miR552
Species Brassica napus
Class miRNA
Genome position ChrC2:10747057-10747226 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537604;SRR537857;SRR538066
Length 27
Mature sequence(if miRNA) 144 - AAUUAUGCAGUUGGGUUGGAGAUGAUC - 170
Stem-loop(if miRNA) --G                                                                     A  U        A
   CAUCUCUAACCCAACUGCAUAAUUUACUGCAAAAUAGAGUAAAUUAUGCAGUUAUGAACAAACAAAAAA GU UUACUCCA A
   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
   GUAGAGGUUGGGUUGACGUAUUAAAUGACGUUUUAUCUCGUUUAAUACGUCAAUACUUGUUUGUUUUUU CG AAUGAGGU U
CUA                                                                     A  U        A
Stem-loop sequence GCAUCUCUAACCCAACUGCAUAAUUUACUGCAAAAUAGAGUAAAUUAUGCAGUUAUGAACAAACAAAAAAAGUUUUACUCCAAAUAUGGAGUAAUGCAUUUUUUGUUUGUUCAUAACUGCAUAAUUUGCUCUAUUUUGCAGUAAAUUAUGCAGUUGGGUUGGAGAUGAUC