ncRNA ID | novel_bna_miR552 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC2:10747057-10747226 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604;SRR537857;SRR538066 |
Length | 27 |
Mature sequence(if miRNA) | 144 - AAUUAUGCAGUUGGGUUGGAGAUGAUC - 170 |
Stem-loop(if miRNA) |
--G                                                                     A  U        A    CAUCUCUAACCCAACUGCAUAAUUUACUGCAAAAUAGAGUAAAUUAUGCAGUUAUGAACAAACAAAAAA GU UUACUCCA A    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    GUAGAGGUUGGGUUGACGUAUUAAAUGACGUUUUAUCUCGUUUAAUACGUCAAUACUUGUUUGUUUUUU CG AAUGAGGU U CUA                                                                     A  U        A |
Stem-loop sequence | GCAUCUCUAACCCAACUGCAUAAUUUACUGCAAAAUAGAGUAAAUUAUGCAGUUAUGAACAAACAAAAAAAGUUUUACUCCAAAUAUGGAGUAAUGCAUUUUUUGUUUGUUCAUAACUGCAUAAUUUGCUCUAUUUUGCAGUAAAUUAUGCAGUUGGGUUGGAGAUGAUC |