ncRNA ID | novel_bna_miR550 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:43266871-43267011 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604;SRR537609;SRR537612;SRR537633;SRR538066 |
Length | 26 |
Mature sequence(if miRNA) | 1 - GAGGAUUUUACGUGAAUAACGGUAUC - 26 |
Stem-loop(if miRNA) |
--     U          UA CG                 U      CUAAC    -AAA  C  U     UA   GAGGA UUUACGUGAA  A  GUAUCAUCGUUAUUUCC CGUAAA     GACA    AC UU CGUCG  A   ||||| ||||||||||  |  ||||||||||||||||| ||||||     ||||    || || |||||   CUCCU GGAUGCACUU  U  UAUAGUAGCAAUAAAGG GCAUUU     CUGU    UG AA GUAGC  A UG     U          UG AU                 U      ----A    GCAG  U  U     UG |
Stem-loop sequence | GAGGAUUUUACGUGAAUAACGGUAUCAUCGUUAUUUCCUCGUAAACUAACGACAAAAACCUUUCGUCGUAAAGUCGAUGUAAUGUGACGUGUCAUUUACGUGGAAAUAACGAUGAUAUUAUGUUUCACGUAGGUUCCUCGU |