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BaseInfo

ncRNA ID novel_bna_miR547
Species Brassica napus
Class miRNA
Genome position ChrA6:37362116-37362292 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537604
Length 20
Mature sequence(if miRNA) 1 - GUUUAAAGUGGCUGCAACUA - 20
Stem-loop(if miRNA) --       A     GAAAGAUAAAAG       ---------------UGU   -   AGA    UAUU GAGACUAAUAGCUGAUAGAGCUUUAUUGA
  GUUGUAG CAUUU            AUAGAUU                  GCU CUA   AGCU    G                             A
  ||||||| |||||            |||||||                  ||| |||   ||||    |
  CAACGUC GUGAA            UAUUUAG                  AAC ACU   GUUG    A                             U
AU       G     AUUUGAAGAAAA       UUAGUUAUAUGAAUCGAG   C   ---    ---- GAGUUCGAAAGAGAAAAUCAAAGAAACAG
Stem-loop sequence GUUGUAGACAUUUGAAAGAUAAAAGAUAGAUUUGUGCUCUAAGAAGCUUAUUGGAGACUAAUAGCUGAUAGAGCUUUAUUGAAUGACAAAGAAACUAAAAGAGAAAGCUUGAGAGUUGUCACCAAGAGCUAAGUAUAUUGAUUGAUUUAUAAAAGAAGUUUAAAGUGGCUGCAACUA