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BaseInfo

ncRNA ID ath-miRf10600-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UCACUCGACCUAGGGGUCGAGUA - NA
Stem-loop(if miRNA)   G G  U         GGU          -ACG   AGA
CU A GU ACUCGACCU   GGUCGAGUGG    GGA   A
|| | || |||||||||   ||||||||||    |||
GG U UA UGAGCUGGG   CCAGCUCACU    CCU   U
  G G  -         GAU          GAAA   CGG
Stem-loop sequence CUGAGGUUACUCGACCUGGUGGUCGAGUGGACGGGAAGAAUGGCUCCAAAGUCACUCGACCUAGGGGUCGAGUAUGUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT014714.1
ncRNA:23   AUGAGCUGGGGAUCCAGCUCACU   1
  |||||||||||*|||||||||||
targets:137   UACUCGACCCCCAGGUCGAGUGA   159

1.5 Arabidopsis thaliana At4g05636.1 mRNA sequence NA coding protein psRNATarget
BT015478.1
ncRNA:23   AUGAGCUGGGGAUCCAGCUCACU   1
  |||||||||||*|||||||||||
targets:137   UACUCGACCCCCAGGUCGAGUGA   159

1.5 Arabidopsis thaliana At4g05636 mRNA sequence NA coding protein psRNATarget
EF183005.1
ncRNA:23   AUGAGCUGGGGAUCCAGCUCACU   1
  *||||||||=|*|||||||||||
targets:1865   CACUCGACCUCGAGGUCGAGUGA   1887

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:23   AUGAGCUGGGGAUCCAGCUCACU   1
  *||||||||||*||||||||||*
targets:855   CACUCGACCCCGAGGUCGAGUGC   877

2.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:23   AUGAGCUGGGGAUCCAGCUCACU   1
  *||||||||||*||||||||||*
targets:1618   CACUCGACCCCGAGGUCGAGUGU   1640

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget