ncRNA ID | novel_bna_miR546 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA6:44749397-44749544 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604;SRR537657;SRR537857;SRR538151 |
Length | 27 |
Mature sequence(if miRNA) | 1 - UUUUAGCGGAAUAUAAGAAACUGUAUC - 27 |
Stem-loop(if miRNA) |
--U              A        A                      A                 UUA   G    UUUAGCGGAAUAUA GAAACUGU UCUUAACUUUUAACUAAAAAAG UAAGAAUCGGCUCUUAA   AUC G    |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||   ||| U    GAAUCGCCUUAUAU CUUUGACA AGAAUUGAAAAUUGAUUUUUUC AUUCUUGGCCGAGAAUU   UAG U UAU              G        A                      A                 -UA   A |
Stem-loop sequence | UUUUAGCGGAAUAUAAGAAACUGUAUCUUAACUUUUAACUAAAAAAGAUAAGAAUCGGCUCUUAAUUAAUCGGUUAGAUAUUUAAGAGCCGGUUCUUAACUUUUUUAGUUAAAAGUUAAGAAACAGUUUCGUAUAUUCCGCUAAGUAU |