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BaseInfo

ncRNA ID novel_bna_miR546
Species Brassica napus
Class miRNA
Genome position ChrA6:44749397-44749544 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537604;SRR537657;SRR537857;SRR538151
Length 27
Mature sequence(if miRNA) 1 - UUUUAGCGGAAUAUAAGAAACUGUAUC - 27
Stem-loop(if miRNA) --U              A        A                      A                 UUA   G
   UUUAGCGGAAUAUA GAAACUGU UCUUAACUUUUAACUAAAAAAG UAAGAAUCGGCUCUUAA   AUC G
   |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||   ||| U
   GAAUCGCCUUAUAU CUUUGACA AGAAUUGAAAAUUGAUUUUUUC AUUCUUGGCCGAGAAUU   UAG U
UAU              G        A                      A                 -UA   A
Stem-loop sequence UUUUAGCGGAAUAUAAGAAACUGUAUCUUAACUUUUAACUAAAAAAGAUAAGAAUCGGCUCUUAAUUAAUCGGUUAGAUAUUUAAGAGCCGGUUCUUAACUUUUUUAGUUAAAAGUUAAGAAACAGUUUCGUAUAUUCCGCUAAGUAU