ncRNA ID | novel_bna_miR544 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA5:22636480-22636633 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604;SRR537612;SRR537633;SRR537657 |
Length | 27 |
Mature sequence(if miRNA) | 128 - AAAACUCUAAACCCUAAACCCUAAAUC - 154 |
Stem-loop(if miRNA) |
-A    UC    C  U                              A    --     UG     -U        UUU   AAAC  UAAA CC AAACCCUAAAUCCUAAACCCUAAACCCUUG GUGA  UUUAG  UUUAG  GAUUUUGA   A   ||||  |||| || |||||||||||||||||||||||||||||| ||||  |||||  |||||  ||||||||   UUUG  AUUU GG UUUGGGAUUUGGGAUUUGGGAUUUGGGAAC CAUU  GGAUU  AGAUC  UUAGAAUU   A GA    GA    A  C                              C    UG     UG     CU        UGA |
Stem-loop sequence | AAAACUCUAAACCCUAAACCCUAAAUCCUAAACCCUAAACCCUUGAGUGAUUUAGUGUUUAGUGAUUUUGAUUUAAAGUUUAAGAUUUCCUAGAGUUUAGGGUUUACCCAAGGGUUUAGGGUUUAGGGUUUAGGGUUUCGGAUUUAAGGUUUAG |