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BaseInfo

ncRNA ID novel_bna_miR544
Species Brassica napus
Class miRNA
Genome position ChrA5:22636480-22636633 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537604;SRR537612;SRR537633;SRR537657
Length 27
Mature sequence(if miRNA) 128 - AAAACUCUAAACCCUAAACCCUAAAUC - 154
Stem-loop(if miRNA) -A    UC    C  U                              A    --     UG     -U        UUU
  AAAC  UAAA CC AAACCCUAAAUCCUAAACCCUAAACCCUUG GUGA  UUUAG  UUUAG  GAUUUUGA   A
  ||||  |||| || |||||||||||||||||||||||||||||| ||||  |||||  |||||  ||||||||
  UUUG  AUUU GG UUUGGGAUUUGGGAUUUGGGAUUUGGGAAC CAUU  GGAUU  AGAUC  UUAGAAUU   A
GA    GA    A  C                              C    UG     UG     CU        UGA
Stem-loop sequence AAAACUCUAAACCCUAAACCCUAAAUCCUAAACCCUAAACCCUUGAGUGAUUUAGUGUUUAGUGAUUUUGAUUUAAAGUUUAAGAUUUCCUAGAGUUUAGGGUUUACCCAAGGGUUUAGGGUUUAGGGUUUAGGGUUUCGGAUUUAAGGUUUAG