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BaseInfo

ncRNA ID novel_bna_miR541
Species Brassica napus
Class miRNA
Genome position ChrA7:18009734-18009928 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537603;SRR537633;SRR537857;SRR538151
Length 26
Mature sequence(if miRNA) 170 - UCAACUCUAAACCCUAAACCCUAAUC - 195
Stem-loop(if miRNA) --                        U         AUA     G    G  GAU UU    GG UUA  G  CG     CAGA         G    A
  UCAACUCUAAACCCUAAACCCUAA CUCUAAACC   AAACC UAGA UU   G  UUAG  U   GG UU  AAUUU    AAAUAUAGG UUUA G
  |||||||||||||||||||||||| |||||||||   ||||| |||| ||   |  ||||  |   || ||  |||||    ||||||||| |||| G
  AGUUGAGAUUUGGGAUUUGGGAUU GGGAUUUGG   UUUGG AUUU GG   U  GAUU  G   UU AG  UUGGG    UUUGUAUUU GGAU U
GU                        U         -GA     G    G  AUU GG    UU UAG  G  AU     ---A         G    U
Stem-loop sequence UCAACUCUAAACCCUAAACCCUAAUCUCUAAACCAUAAAACCGUAGAGUUGAUGUUUUAGGGUUUAGGGUUCGAAUUUCAGAAAAUAUAGGGUUUAAGGUUUAGGGUUUAUGUUUAGGGUUUAGAGUUGAUGUUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGAGUUGAUG