ncRNA ID | novel_bna_miR541 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA7:18009734-18009928 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537603;SRR537633;SRR537857;SRR538151 |
Length | 26 |
Mature sequence(if miRNA) | 170 - UCAACUCUAAACCCUAAACCCUAAUC - 195 |
Stem-loop(if miRNA) |
--                        U         AUA     G    G  GAU UU    GG UUA  G  CG     CAGA         G    A   UCAACUCUAAACCCUAAACCCUAA CUCUAAACC   AAACC UAGA UU   G  UUAG  U   GG UU  AAUUU    AAAUAUAGG UUUA G   |||||||||||||||||||||||| |||||||||   ||||| |||| ||   |  ||||  |   || ||  |||||    ||||||||| |||| G   AGUUGAGAUUUGGGAUUUGGGAUU GGGAUUUGG   UUUGG AUUU GG   U  GAUU  G   UU AG  UUGGG    UUUGUAUUU GGAU U GU                        U         -GA     G    G  AUU GG    UU UAG  G  AU     ---A         G    U |
Stem-loop sequence | UCAACUCUAAACCCUAAACCCUAAUCUCUAAACCAUAAAACCGUAGAGUUGAUGUUUUAGGGUUUAGGGUUCGAAUUUCAGAAAAUAUAGGGUUUAAGGUUUAGGGUUUAUGUUUAGGGUUUAGAGUUGAUGUUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGAGUUGAUG |