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BaseInfo

ncRNA ID	novel_bna_miR526
Species	Brassica napus
Class	miRNA
Genome position	ChrC5:4690151-4690248 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537603;SRR527228
Length	21
Mature sequence(if miRNA)	78 - GGGCAAGAUCUCUAUUGGCAG - 98
Stem-loop(if miRNA)	--     A       A        A   -      UU     UU    UCU   GGGCA GAUCUCU UUGGCAGA AAC CAUUAC  AGAUC  UGCA   C   ||||| ||||||| |||||||| ||| ||||||  |||||  ||||   CCCGU UUAGAGG AACCGUCU UUG GUGAUG  UUUAG  ACGU   U GG     -       A        C   A      --     UU    CUU
Stem-loop sequence	GGGCAAGAUCUCUAUUGGCAGAAAACCAUUACUUAGAUCUUUGCAUCUCUUUCUGCAUUGAUUUGUAGUGAGUUCUCUGCCAAAGGAGAUUUGCCCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013797591.1	ncRNA:21   GACGGUUAUCUCUAGAACGGG   1   =||||||*||||||||||||= targets:1900   UUGCCAACAGAGAUCUUGCCU   1920 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106357875 (LOC106357875), transcript variant X2, mRNA	uncharacterized LOC106357875(LOC106357875)	coding protein	psRNATarget
XM_013797590.1	ncRNA:21   GACGGUUAUCUCUAGAACGGG   1   =||||||*||||||||||||= targets:1938   UUGCCAACAGAGAUCUUGCCU   1958 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized LOC106357875 (LOC106357875), transcript variant X1, mRNA	uncharacterized LOC106357875(LOC106357875)	coding protein	psRNATarget
XM_013829613.1	ncRNA:21   GACGGUUAUCUCUAGAACGGG   1   *||||=*|||||||||||||= targets:1079   GUGCCGCUAGAGAUCUUGCCU   1099 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106389382 (LOC106389382), transcript variant X1, mRNA	uncharacterized LOC106389382(LOC106389382)	coding protein	psRNATarget
XM_013829614.1	ncRNA:21   GACGGUUAUCUCUAGAACGGG   1   *||||=*|||||||||||||= targets:1169   GUGCCGCUAGAGAUCUUGCCU   1189 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106389382 (LOC106389382), transcript variant X2, mRNA	uncharacterized LOC106389382(LOC106389382)	coding protein	psRNATarget