ncRNA ID | novel_bna_miR519 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC8:14308838-14309057 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537602;SRR537657 |
Length | 27 |
Mature sequence(if miRNA) | 194 - AUGGUGGAUUCUCUGUUUCCGAGCAUC - 220 |
Stem-loop(if miRNA) |
--                                               U                                                     UA A  U   UGCUCGGAAACAGAGAAUCCACCAUCAAAUCUGAUCAAACGAAAGAU CUAAAAGAAGUGUAAAUAGGCACAAGACCACAACAAUCUUUUCGUCUUCCUCG  G UU U   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||   ACGAGCCUUUGUCUCUUAGGUGGUAGUUUAGACUAGUUUGCUUUCUA GAUUUUCUUCACAUUUAUUCGUGUUCUGGUGUUGUUAGAAAAGCAGAAGGAGU  C AG C CU                                               U                                                     GA G  U |
Stem-loop sequence | UGCUCGGAAACAGAGAAUCCACCAUCAAAUCUGAUCAAACGAAAGAUUCUAAAAGAAGUGUAAAUAGGCACAAGACCACAACAAUCUUUUCGUCUUCCUCGUAGAUUUUCUGAGCAGUGAGGAAGACGAAAAGAUUGUUGUGGUCUUGUGCUUAUUUACACUUCUUUUAGUAUCUUUCGUUUGAUCAGAUUUGAUGGUGGAUUCUCUGUUUCCGAGCAUC |