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BaseInfo

ncRNA ID novel_bna_miR518
Species Brassica napus
Class miRNA
Genome position ChrC8:14293900-14294119 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537602;SRR537657
Length 27
Mature sequence(if miRNA) 194 - AUGGUGGAUUCUCUGUUUCCGAGCAUC - 220
Stem-loop(if miRNA) --                                               U                                                     UA A  U
  UGCUCGGAAACAGAGAAUCCACCAUCAAAUCUGAUCAAACGAAAGAU CUAAAAGAAGUGUAAAUAGGCACAAGACCACAACAAUCUUUUCGUCUUCCUCG  G UU U
  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||
  ACGAGCCUUUGUCUCUUAGGUGGUAGUUUAGACUAGUUUGCUUUCUA GAUUUUCUUCACAUUUAUUCGUGUUCUGGUGUUGUUAGAAAAGCAGAAGGAGU  C AG C
CU                                               U                                                     GA G  U
Stem-loop sequence UGCUCGGAAACAGAGAAUCCACCAUCAAAUCUGAUCAAACGAAAGAUUCUAAAAGAAGUGUAAAUAGGCACAAGACCACAACAAUCUUUUCGUCUUCCUCGUAGAUUUUCUGAGCAGUGAGGAAGACGAAAAGAUUGUUGUGGUCUUGUGCUUAUUUACACUUCUUUUAGUAUCUUUCGUUUGAUCAGAUUUGAUGGUGGAUUCUCUGUUUCCGAGCAUC