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BaseInfo

ncRNA ID	novel_bna_miR511
Species	Brassica napus
Class	miRNA
Genome position	ChrA1:15434478-15434646 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537602;SRR537604;SRR537609;SRR537612;SRR537633;SRR537657;SRR537857;SRR538067;SRR538151;SRR538253
Length	21
Mature sequence(if miRNA)	1 - UUGGACUGAAGGGAACUCCCU - 21
Stem-loop(if miRNA)	--A          A      U  A  UGU  U     --        U  -    A AC     C     CU  C     -  --  AA    GAGUUUCCUU AGUCCA UC CA   UG GAUUU  GAUCCAAU AG CUCC G  UCAUU ACUCA  UA CGAGU CA  CU  A    |||||||||| |||||| || ||   || |||||  |||||||| || |||| |  ||||| |||||  || ||||| ||  ||    CUCAAGGGAA UCAGGU AG GU   AC UUAGA  CUAGGUUA UC GAGG C  AGUAA UGAGU  AU GCUCA GU  GG  A UCC          G      U  C  --U  -     UU        U  A    G GU     A     AC  U     A  AA  AU
Stem-loop sequence	AGAGUUUCCUUAAGUCCAUUCACAUGUUGUGAUUUGAUCCAAUUAGCUCCAGACUCAUUCACUCACUUACCGAGUCACUAAAAUAGGAAUGAACUCGUUACAUGAGUAAAUGAUGCGGGAGACUUAUUGGAUCUUAGAUUCAUUGCGAUUGGACUGAAGGGAACUCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013876776.1	ncRNA:21   UCCCUCAAGGGAAGUCAGGUU   1   |*||=||*||||||||||||= targets:1334   ACGGGGUACCCUUCAGUCCAG   1354 Target Full Sequence	3.0	PREDICTED: Brassica napus transcription factor TCP10-like (LOC106435851), transcript variant X1, mRNA	transcription factor TCP10-like(LOC106435851)	coding protein	psRNATarget
XM_013876777.1	ncRNA:21   UCCCUCAAGGGAAGUCAGGUU   1   |*||=||*||||||||||||= targets:1335   ACGGGGUACCCUUCAGUCCAG   1355 Target Full Sequence	3.0	PREDICTED: Brassica napus transcription factor TCP10-like (LOC106435851), transcript variant X2, mRNA	transcription factor TCP10-like(LOC106435851)	coding protein	psRNATarget
XM_013893295.1	ncRNA:21   UCCCUCAAGGGAAGUCAGGUU   1   |*||=||*||||||||||||= targets:1339   ACGGGGUACCCUUCAGUCCAG   1359 Target Full Sequence	3.0	PREDICTED: Brassica napus transcription factor TCP10-like (LOC106451371), transcript variant X2, mRNA	transcription factor TCP10-like(LOC106451371)	coding protein	psRNATarget
XM_013893294.1	ncRNA:21   UCCCUCAAGGGAAGUCAGGUU   1   |*||=||*||||||||||||= targets:1339   ACGGGGUACCCUUCAGUCCAG   1359 Target Full Sequence	3.0	PREDICTED: Brassica napus transcription factor TCP10-like (LOC106451371), transcript variant X1, mRNA	transcription factor TCP10-like(LOC106451371)	coding protein	psRNATarget