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BaseInfo

ncRNA ID novel_bna_miR504
Species Brassica napus
Class miRNA
Genome position ChrA9:39512981-39513100 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495;SRR1363496
Length 24
Mature sequence(if miRNA) 97 - AGGGUUUUUGUGUGACGGAUUUUA - 120
Stem-loop(if miRNA) --         U  U        UC   UU AUA  UG   ---AC   -    G UC    G
  GAAUUCGUC CG CAAGAGCU  AAU  G   UG  GCU     UCG UCUG U  CUCG G
  ||||||||| || ||||||||  |||  |   ||  |||     ||| |||| |  |||| G
  UUUAGGCAG GU GUUUUUGG  UUA  U   GC  UGA     AGC AGAU A  GAGU U
AU         U  -        GA   GG -CC  GU   AUUCU   U    - GA    U
Stem-loop sequence GAAUUCGUCUCGUCAAGAGCUUCAAUUUGAUAUGUGGCUACUCGUCUGGUUCCUCGGGGUUUGAGAGAUAGAUCGAUCUUAAGUUGCGCCUGGAUUAGGGUUUUUGUGUGACGGAUUUUA