ncRNA ID | novel_bna_miR504 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:39512981-39513100 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495;SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 97 - AGGGUUUUUGUGUGACGGAUUUUA - 120 |
Stem-loop(if miRNA) |
--         U  U        UC   UU AUA  UG   ---AC   -    G UC    G   GAAUUCGUC CG CAAGAGCU  AAU  G   UG  GCU     UCG UCUG U  CUCG G   ||||||||| || ||||||||  |||  |   ||  |||     ||| |||| |  |||| G   UUUAGGCAG GU GUUUUUGG  UUA  U   GC  UGA     AGC AGAU A  GAGU U AU         U  -        GA   GG -CC  GU   AUUCU   U    - GA    U |
Stem-loop sequence | GAAUUCGUCUCGUCAAGAGCUUCAAUUUGAUAUGUGGCUACUCGUCUGGUUCCUCGGGGUUUGAGAGAUAGAUCGAUCUUAAGUUGCGCCUGGAUUAGGGUUUUUGUGUGACGGAUUUUA |