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BaseInfo

ncRNA ID novel_bna_miR500
Species Brassica napus
Class miRNA
Genome position ChrA5:30000687-30000887 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537601
Length 25
Mature sequence(if miRNA) 1 - ACAUUGACUCUAACAGAAGUUAAUC - 25
Stem-loop(if miRNA) --                      A     AU    C         C    U     UG            -UUU     -            ----    AC
  ACAUUGACUCUAACAGAAGUUA UCAAC  UUAA AAGAUAAGA GACG CGUUU  AUAUAUGUAUUU    AAAAA AUAUGUUCAUUU    CGGA  U
  |||||||||||||||||||||| |||||  |||| ||||||||| |||| |||||  ||||||||||||    ||||| ||||||||||||    ||||  C
  UGUAACUGAGAUUGUCUUCAAU AGUUG  AAUU UUCUAUUCU CUGC GCAAA  UAUAUAUAUAAA    UUUUU UAUACAAGUAAG    GCCU  A
GA                      C     GC    A         U    U     UA            UUUU     A            UCAU    AA
Stem-loop sequence ACAUUGACUCUAACAGAAGUUAAUCAACAUUUAACAAGAUAAGACGACGUCGUUUUGAUAUAUGUAUUUUUUAAAAAAUAUGUUCAUUUCGGAACUCAAAUCCGUACUGAAUGAACAUAUAUUUUUUUUUAAAUAUAUAUAUAUAAACGUCGUCUUCUUAUCUUAUUAACGGUUGACUAACUUCUGUUAGAGUCAAUGUAG