ncRNA ID | novel_bna_miR497 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:38391948-38392129 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537601 |
Length | 27 |
Mature sequence(if miRNA) | 156 - CGAUGUAUAUAUGCCUAAAAACGCAUC - 182 |
Stem-loop(if miRNA) |
--           A    A  C           - -------U    AUAAAAAAACGUUCAGAAUAUACCGAGGGAAACCUUUCCUCGGAAUAU   UGCGUUUUUGG CAUA AU CAUCGAUCGAU C        GUUU                                                A   ||||||||||| |||| || ||||||||||| |        ||||   ACGCAAAAAUC GUAU UA GUAGCUAGCUA G        CUUA                                                C CU           C    A  U           C CAAAAAUC    UAUGGCUCCCUAAACAGGGAGCCAUAUAUGGCUCCUUGGCAAGGGAGC |
Stem-loop sequence | UGCGUUUUUGGACAUAAAUCCAUCGAUCGAUCUGUUUAUAAAAAAACGUUCAGAAUAUACCGAGGGAAACCUUUCCUCGGAAUAUACCGAGGGAACGGUUCCUCGGUAUAUACCGAGGGACAAAUCCCUCGGUAUAUUCCUAAAAACGCAUCGAUCGAUGUAUAUAUGCCUAAAAACGCAUC |