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BaseInfo

ncRNA ID novel_bna_miR497
Species Brassica napus
Class miRNA
Genome position ChrA4:38391948-38392129 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537601
Length 27
Mature sequence(if miRNA) 156 - CGAUGUAUAUAUGCCUAAAAACGCAUC - 182
Stem-loop(if miRNA) --           A    A  C           - -------U    AUAAAAAAACGUUCAGAAUAUACCGAGGGAAACCUUUCCUCGGAAUAU
  UGCGUUUUUGG CAUA AU CAUCGAUCGAU C        GUUU                                                A
  ||||||||||| |||| || ||||||||||| |        ||||
  ACGCAAAAAUC GUAU UA GUAGCUAGCUA G        CUUA                                                C
CU           C    A  U           C CAAAAAUC    UAUGGCUCCCUAAACAGGGAGCCAUAUAUGGCUCCUUGGCAAGGGAGC
Stem-loop sequence UGCGUUUUUGGACAUAAAUCCAUCGAUCGAUCUGUUUAUAAAAAAACGUUCAGAAUAUACCGAGGGAAACCUUUCCUCGGAAUAUACCGAGGGAACGGUUCCUCGGUAUAUACCGAGGGACAAAUCCCUCGGUAUAUUCCUAAAAACGCAUCGAUCGAUGUAUAUAUGCCUAAAAACGCAUC