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BaseInfo

ncRNA ID novel_bna_miR494
Species Brassica napus
Class miRNA
Genome position ChrA3:49231491-49231538 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537601
Length 21
Mature sequence(if miRNA) 1 - CGUCGGUAUGUCGUCGGAAUC - 21
Stem-loop(if miRNA) --C                   CA
   GUCGGUAUGUCGUCGGAAU  U
   |||||||||||||||||||
   CAGCCAUACAGCAGCCUUA  G
AAA                   UU
Stem-loop sequence CGUCGGUAUGUCGUCGGAAUCAUGUUAUUCCGACGACAUACCGACAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013882374.1
ncRNA:21   CUAAGGCUGCUGUAUGGCUGC   1
  *||*|||||||||||||||||
targets:913   UAUACCGACGACAUACCGACG   933

1.0 PREDICTED: Brassica napus ATP-dependent RNA helicase DHX36-like (LOC106440643), mRNA ATP-dependent RNA helicase DHX36-like(LOC106440643) coding protein psRNATarget