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BaseInfo

ncRNA ID novel_bna_miR490
Species Brassica napus
Class miRNA
Genome position ChrA3:19446507-19446550 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537601
Length 19
Mature sequence(if miRNA) 1 - GGCGGGCUGCUUGAGCUUC - 19
Stem-loop(if miRNA) --     G      GA   U U
  GGCGG CUGCUU  GCU C A
  ||||| ||||||  ||| |
  CCGUC GGCGAG  CGG G A
CU     A      AG   U U
Stem-loop sequence GGCGGGCUGCUUGAGCUUCUAAUGUGGCGAGAGCGGACUGCCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013821362.1
ncRNA:19   CUUCGAGUUCGUCGGGCGG   1
  ||||||||||||||||||*
targets:820   GAAGCUCAAGCAGCCCGCG   838

1.0 PREDICTED: Brassica napus uncharacterized serine-rich protein C215.13-like (LOC106381458), mRNA uncharacterized serine-rich protein C215.13-like(LOC106381458) coding protein psRNATarget