ncRNA ID | novel_bna_miR487 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:3138105-3138237 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537601;SRR537603;SRR538151;SRR538225;SRR538253 |
Length | 30 |
Mature sequence(if miRNA) | 104 - ACCUUUAUAAGUCUCUGAGCAUCGCUUAUU - 133 |
Stem-loop(if miRNA) |
--       U       UG         UAU    UCGCCGAUU      AC      ACAUCUCACUACCA   ACCUUUA AAGUCUC  AGCAUCGCU   UUCG         GCAUUC  ACGCGC              C   ||||||| |||||||  |||||||||   ||||         ||||||  ||||||   UGGGAAU UUCGGGG  UUGUGGCGA   GAGC         CGUAGG  UGCGUG              C UU       U       GU         -UU    ---------      -C      CACACACUUACCUU |
Stem-loop sequence | ACCUUUAUAAGUCUCUGAGCAUCGCUUAUUUCGUCGCCGAUUGCAUUCACACGCGCACAUCUCACUACCACCUUCCAUUCACACACGUGCGUCGGAUGCCGAGUUAGCGGUGUUUGGGGGCUUUUAAGGGUUU |