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BaseInfo

ncRNA ID novel_bna_miR487
Species Brassica napus
Class miRNA
Genome position ChrA2:3138105-3138237 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537601;SRR537603;SRR538151;SRR538225;SRR538253
Length 30
Mature sequence(if miRNA) 104 - ACCUUUAUAAGUCUCUGAGCAUCGCUUAUU - 133
Stem-loop(if miRNA) --       U       UG         UAU    UCGCCGAUU      AC      ACAUCUCACUACCA
  ACCUUUA AAGUCUC  AGCAUCGCU   UUCG         GCAUUC  ACGCGC              C
  ||||||| |||||||  |||||||||   ||||         ||||||  ||||||
  UGGGAAU UUCGGGG  UUGUGGCGA   GAGC         CGUAGG  UGCGUG              C
UU       U       GU         -UU    ---------      -C      CACACACUUACCUU
Stem-loop sequence ACCUUUAUAAGUCUCUGAGCAUCGCUUAUUUCGUCGCCGAUUGCAUUCACACGCGCACAUCUCACUACCACCUUCCAUUCACACACGUGCGUCGGAUGCCGAGUUAGCGGUGUUUGGGGGCUUUUAAGGGUUU