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BaseInfo

ncRNA ID novel_bna_miR477
Species Brassica napus
Class miRNA
Genome position ChrC7:36751138-36751266 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537601
Length 25
Mature sequence(if miRNA) 1 - CGACAAACUAGUGAUCCUCGGAAUC - 25
Stem-loop(if miRNA) --    -    U  UGA         ---UC         --AU  G           U   G     A
  CGAC AAAC AG   UCCUCGGAA     UCCUCGGAA    UU UUUCCUCGGAA UCC UCGGA A
  |||| |||| ||   |||||||||     |||||||||    || ||||||||||| ||| |||||
  GCUG UUUG UC   AGGAGCCUU     AGGAGCCUU    AA AAAGGAGCCUU AGG AGCCU A
UG    C    U  ---         UAUUA         AAAU  G           U   G     U
Stem-loop sequence CGACAAACUAGUGAUCCUCGGAAUCUCCUCGGAAAUUUGUUUCCUCGGAAUUCCGUCGGAAAAUUCCGAGGGAUUUCCGAGGAAAGAAUAAAUUCCGAGGAAUUAUUUCCGAGGACUUGUUUCGUCGGU