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BaseInfo

ncRNA ID novel_bna_miR471
Species Brassica napus
Class miRNA
Genome position ChrC6:33770966-33771053 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537601;SRR538253
Length 23
Mature sequence(if miRNA) 1 - GGGAAAUGGAGUGAUGAACAAUC - 23
Stem-loop(if miRNA) --                     U      ACCC      C  U
  GGGAAAUGGAGUGAUGAACAA CAAAAA    AUUACU CA U
  ||||||||||||||||||||| ||||||    |||||| ||
  CCCUUUAUCUCACUAUUUGUU GUUUUU    UAAUGA GU U
CA                     U      GCAC      C  A
Stem-loop sequence GGGAAAUGGAGUGAUGAACAAUCAAAAAACCCAUUACUCCAUUUAUGCAGUAAUCACGUUUUUGUUUGUUUAUCACUCUAUUUCCCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013854972.1
ncRNA:23   CUAACAAGUAGUGAGGUAAAGGG   1
  *=|||||||||*|||||||||||
targets:1189   UGUUGUUCAUCUCUCCAUUUCCC   1211

1.5 PREDICTED: Brassica napus GDSL esterase/lipase At5g33370-like (LOC106414292), mRNA GDSL esterase/lipase At5g33370-like(LOC106414292) coding protein psRNATarget