ncRNA ID | novel_bna_miR470 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC6:28345249-28345336 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537601;SRR537603;SRR537609;SRR537612;SRR538253 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GGGAAAUGGAGUGAUGAACAAUC - 23 |
Stem-loop(if miRNA) |
--                     U       CCU      - UA   GGGAAAUGGAGUGAUGAACAA CAAAAAA   AUUACU C  U   ||||||||||||||||||||| |||||||   |||||| |  U   CUCUUUAUCUUACUAUUUGUU GUUUUUU   UAAUGA G  U CA                     U       UAC      C UA |
Stem-loop sequence | GGGAAAUGGAGUGAUGAACAAUCAAAAAACCUAUUACUCUAUUUAUGCAGUAAUCAUUUUUUUGUUUGUUUAUCAUUCUAUUUCUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013854972.1 |
|
1.5 | PREDICTED: Brassica napus GDSL esterase/lipase At5g33370-like (LOC106414292), mRNA | GDSL esterase/lipase At5g33370-like(LOC106414292) | coding protein | psRNATarget |