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BaseInfo

ncRNA ID novel_bna_miR444
Species Brassica napus
Class miRNA
Genome position ChrA4:23824898-23825067 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600;SRR537602;SRR537612;SRR537633;SRR537657;SRR538067;SRR538225;SRR538253
Length 21
Mature sequence(if miRNA) 150 - UUGGACUGAAGGGAGCUCCCU - 170
Stem-loop(if miRNA) --      UU          CU      AUAAUAU    -         -GA    C AC        C  AA     A   AAAGAA
  GGAGCU  CUUCGGUCCA  CAUAGA       GUGA GAUUUAAUU   CUCU G  UCAUUCAU CA  UACCA AUG      U
  ||||||  ||||||||||  ||||||       |||| |||||||||   |||| |  |||||||| ||  ||||| |||
  CCUCGA  GAAGUCAGGU  GUAUCU       CACU CUAAGUUAA   GAGA C  AGUAAGUA GU  AUGGU UAC      A
UC      GG          UC      ----CUU    U         ACA    U GU        A  AA     A   AGAUGU
Stem-loop sequence GGAGCUUUCUUCGGUCCACUCAUAGAAUAAUAUGUGAGAUUUAAUUGACUCUCGACUCAUUCAUCCAAAUACCAAAUGAAAGAAUAUGUAGACAUAUGGUAAAUGAAUGAAUGAUGCUAGAGACAAAUUGAAUCUUCACUUCUCUAUGCUUGGACUGAAGGGAGCUCCCU