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BaseInfo

ncRNA ID novel_bna_miR441
Species Brassica napus
Class miRNA
Genome position ChrA2:29595070-29595241 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600;SRR537604;SRR537609;SRR537612;SRR537857;SRR538067
Length 27
Mature sequence(if miRNA) 1 - AGAGGCAUACAUUGGAGCAUUUUCAUC - 27
Stem-loop(if miRNA) --UA                                  C        -   A              AAA    C    UG      U
    AAAAUGCUCCAAUGUAUGCCUCUAUAAUAGAGUU CUCUAUUU UAG GGAAAAUAUAGAGG   GUUA UUUU  CCUCUA A
    |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||   |||| ||||  ||||||
    UUUUACGAGGUUACAUACGGAGAUAUUAUCUCAA GAGAUAAA AUC CCUUUUAUAUCUCU   CAAU AAAA  GGAGAU U
CUAC                                  A        U   C              AUA    -    GU      U
Stem-loop sequence UAAAAAUGCUCCAAUGUAUGCCUCUAUAAUAGAGUUCCUCUAUUUUAGAGGAAAAUAUAGAGGAAAGUUACUUUUUGCCUCUAUAUUUAGAGGUGAAAAUAACAUAUCUCUAUAUUUUCCCCUAUAAAUAGAGAAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUUUCAUC