ncRNA ID | novel_bna_miR441 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:29595070-29595241 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537600;SRR537604;SRR537609;SRR537612;SRR537857;SRR538067 |
Length | 27 |
Mature sequence(if miRNA) | 1 - AGAGGCAUACAUUGGAGCAUUUUCAUC - 27 |
Stem-loop(if miRNA) |
--UA                                  C        -   A              AAA    C    UG      U     AAAAUGCUCCAAUGUAUGCCUCUAUAAUAGAGUU CUCUAUUU UAG GGAAAAUAUAGAGG   GUUA UUUU  CCUCUA A     |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||   |||| ||||  ||||||     UUUUACGAGGUUACAUACGGAGAUAUUAUCUCAA GAGAUAAA AUC CCUUUUAUAUCUCU   CAAU AAAA  GGAGAU U CUAC                                  A        U   C              AUA    -    GU      U |
Stem-loop sequence | UAAAAAUGCUCCAAUGUAUGCCUCUAUAAUAGAGUUCCUCUAUUUUAGAGGAAAAUAUAGAGGAAAGUUACUUUUUGCCUCUAUAUUUAGAGGUGAAAAUAACAUAUCUCUAUAUUUUCCCCUAUAAAUAGAGAAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUUUCAUC |