ncRNA ID | novel_bna_miR437 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:10176203-10176316 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537600;SRR537604;SRR537612;SRR537857;SRR538067 |
Length | 21 |
Mature sequence(if miRNA) | 94 - AGCGGAAUAUAAGAACAUGUC - 114 |
Stem-loop(if miRNA) |
--               CA     C   CC        U        UUUU   UAA   AGCGGAAUAUAAGAA  UGUCU UUA  UUUUAACU AAAAAGCU    AUU   A   |||||||||||||||  ||||| |||  |||||||| ||||||||    |||   UCGUUUUAUAUUUUU  GCAGA AAU  AAAAUUGA UUUUUCGA    UGG   A CA               AG     A   UU        U        UUCU   CCG |
Stem-loop sequence | AGCGGAAUAUAAGAACAUGUCUCUUACCUUUUAACUUAAAAAGCUUUUUAUUUAAAAGCCGGUUCUUAGCUUUUUUAGUUAAAAUUUAAAAGACGGAUUUUUAUAUUUUGCUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013810588.1 |
|
3.0 | PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA | putative auxin efflux carrier component 8(LOC106370582) | coding protein | psRNATarget |