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BaseInfo

ncRNA ID novel_bna_miR434
Species Brassica napus
Class miRNA
Genome position ChrC9:7166540-7166719 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600;SRR537604;SRR537609;SRR537612;SRR538067
Length 27
Mature sequence(if miRNA) 1 - AGAGGCAUACAUUGGAGCAUUUUCAUC - 27
Stem-loop(if miRNA) --                         A                   A  UG              -------------------UAU  UAUUUCUACC
  UGAAAAUGCUCUAAUGUAUGUUUCU UAAUAGAGUUUCUCUAUUU UA  GGAAAAUAUAGAGA                      GA          U
  ||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||                      ||
  ACUUUUACGAGGUUACAUACGGAGA AUUAUCUCAAGGAGAUAAA AU  UCUUUUAUAUUUUU                      GG          C
CU                         C                   -  CU              UUUUAAUGAAUUAAUGAAAAAC  AGAUAUAAAU
Stem-loop sequence UGAAAAUGCUCUAAUGUAUGUUUCUAUAAUAGAGUUUCUCUAUUUAUAUGGGAAAAUAUAGAGAUAUGAUAUUUCUACCUCUAAAUAUAGAGGCAAAAAGUAAUUAAGUAAUUUUUUUUUAUAUUUUCUUCUAAAAUAGAGGAACUCUAUUACAGAGGCAUACAUUGGAGCAUUUUCAUC