ncRNA ID | novel_bna_miR427 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC7:28236201-28236352 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537600;SRR537604;SRR537612;SRR537657;SRR537857;SRR538066;SRR538067 |
Length | 26 |
Mature sequence(if miRNA) | 127 - GGAGUUUUUAGCGGAAUAUAAGAAUC - 152 |
Stem-loop(if miRNA) |
--            G            CC            C            -C      C   CUC          GGAGUUUUUAGC GAAUAUAAGAAU  GUCUCUUAAUUU UAACUAAAAAAG  UAAGAA CGG   UUAAAUAA   |||||||||||| ||||||||||||  |||||||||||| ||||||||||||  |||||| |||   |||||||G   CUUCAAGAAUCG CUUAUAUUCUUG  CAGAGAAUUGAA AUUGAUUUUUUU  AUUCUU GUC   AAUUUAUA CA            A            AA            A            CU      A   AAA        |
Stem-loop sequence | GGAGUUUUUAGCGGAAUAUAAGAAUCCGUCUCUUAAUUUCUAACUAAAAAAGCUAAGAACCGGCUCUUAAAUAAGAUAUUUAAAAACUGAUUCUUAUCUUUUUUUAGUUAAAAGUUAAGAGACAAGUUCUUAUAUUCAGCUAAGAACUUCAC |