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BaseInfo

ncRNA ID	novel_bna_miR416
Species	Brassica napus
Class	miRNA
Genome position	ChrC5:14110012-14110180 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537600;SRR538066
Length	21
Mature sequence(if miRNA)	1 - AACGGAAUAUAAGAACUCGUC - 21
Stem-loop(if miRNA)	--AA      A      CU     C    C                                     AGAAU       C    U     CGGAAU UAAGAA  CGUCU UUAA UUUUAGCUAAAUAAAGCUAAGAAUCGGUUCUUAAAUA     UUAAGAA AGGU U     |||||| ||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||     ||||||| ||||     GCCUUA AUUCUU  GCAGA AAUU AAAAUCGAUUUAUUUCGAUUCUUGGCCAAGAAUUUAU     GAUUUUU UCCA U AAUC      A      AG     A    A                                     AAAUC       -    U
Stem-loop sequence	AACGGAAUAUAAGAACUCGUCUCUUAACUUUUAGCUAAAUAAAGCUAAGAAUCGGUUCUUAAAUAAGAAUUUAAGAACAGGUUUUUACCUUUUUUAGCUAAAUAUUUAAGAACCGGUUCUUAGCUUUAUUUAGCUAAAAAUUAAAAGACGGAUUCUUAAAUUCCGCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013888671.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCAA   1   **=||*||||||||||||||| targets:1256   AUUGAUUUCUUAUAUUCCGUU   1276 Target Full Sequence	2.0	PREDICTED: Brassica napus flavonol synthase/flavanone 3-hydroxylase-like (LOC106446861), mRNA	flavonol synthase/flavanone 3-hydroxylase-like(LOC106446861)	coding protein	psRNATarget
XM_013810588.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCAA   1   |||||||||||||||||||** targets:1251   GACGAGUUCUUAUAUUCCGCC   1271 Target Full Sequence	2.5	PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA	putative auxin efflux carrier component 8(LOC106370582)	coding protein	psRNATarget
XM_013830747.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCAA   1   ||||=||||||||||||||*| targets:24   GACGGGUUCUUAUAUUCCGAU   44 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X1, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013830748.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCAA   1   ||||=||||||||||||||*| targets:24   GACGGGUUCUUAUAUUCCGAU   44 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X2, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013857661.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCAA   1   *=|||*||||||||||=|||| targets:121   UGCGAUUUCUUAUAUUUCGUU   141 Target Full Sequence	2.5	PREDICTED: Brassica napus cannabidiolic acid synthase-like 2 (LOC106416753), mRNA	cannabidiolic acid synthase-like 2(LOC106416753)	coding protein	psRNATarget