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BaseInfo

ncRNA ID novel_bna_miR415
Species Brassica napus
Class miRNA
Genome position ChrC5:11174615-11174698 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600;SRR537601;SRR537602;SRR537604;SRR537609;SRR537612;SRR537857;SRR538066;SRR538151;SRR538225
Length 23
Mature sequence(if miRNA) 1 - GGGAAAUGGAGUGAUGAACAAUC - 23
Stem-loop(if miRNA) --                     UC       CUAUUAC   AU
  GGGAAAUGGAGUGAUGAACAA  AAAAAAA       UCC  U
  |||||||||||||||||||||  |||||||       |||
  UCUUUUAUUUCACUACUUGUU  UUUUUUU       AGG  G
CA                     --       --CACUA   AC
Stem-loop sequence GGGAAAUGGAGUGAUGAACAAUCAAAAAAACUAUUACUCCAUUGCAGGAAUCACUUUUUUUUUGUUCAUCACUUUAUUUUCUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013854972.1
ncRNA:23   CUAACAAGUAGUGAGGUAAAGGG   1
  *=|||||||||*|||||||||||
targets:1189   UGUUGUUCAUCUCUCCAUUUCCC   1211

1.5 PREDICTED: Brassica napus GDSL esterase/lipase At5g33370-like (LOC106414292), mRNA GDSL esterase/lipase At5g33370-like(LOC106414292) coding protein psRNATarget