ncRNA ID | novel_bna_miR406 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:8476367-8476538 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537600;SRR537604;SRR537609;SRR537612;SRR538067 |
Length | 27 |
Mature sequence(if miRNA) | 146 - AGAGGCAUACAUUAGAACAUUUUCAUC - 172 |
Stem-loop(if miRNA) |
-- C C A G C - AG AAA C U UGAAAAUG UC AAUGUAU CCU UAUAAUAGAGUU CUCUAUUU UAG GAAAAUAUAGAGG GAUA UUUUUGCCUCUA A |||||||| || ||||||| ||| |||||||||||| |||||||| ||| ||||||||||||| |||| |||||||||||| ACUUUUAC AG UUACAUA GGA AUAUUAUCUCAA GAGAUAAA AUC CUUUUAUAUCUCU CUAU AAAGAUGGAGAU U CU A A C G A U CU AUA - U |
Stem-loop sequence | UGAAAAUGCUCCAAUGUAUACCUGUAUAAUAGAGUUCCUCUAUUUUAGAGGAAAAUAUAGAGGAAAGAUACUUUUUGCCUCUAUAUUUAGAGGUAGAAAUAUCAUAUCUCUAUAUUUUCUCCUAUAAAUAGAGAAACUCUAUUAUAGAGGCAUACAUUAGAACAUUUUCAUC |