ncRNA ID | ath-miRf10585-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - CUACUCGACCUUUGGGUCGAGUGGU - NA |
Stem-loop(if miRNA) |
  UG  GA          CAU         -A   GA     --UGAU      GAGGG         U G           -U  A  G A GG  AA  CACUCGACCU   GGUCGAGUG  AGC  UCGAG      GGAGAC     CACUCGACC C GGGUCGAGUGG  GA GU A G ||  ||  ||||||||||   |||||||||  |||  |||||      ||||||     ||||||||| | |||||||||||  || || | U CU  UU  GUGAGCUGGG   CCAGCUCAU  UCG  AGUUC      UCUCUG     GUGAGCUGG G UCCAGCUCAUC  CU UA U A   GU  -G          UUU         CC   -A     UAGAGU      -----         U G           UC  G  G G |
Stem-loop sequence | GGUGAAGACACUCGACCUCAUGGUCGAGUGAAGCGAUCGAGUGAUGGAGACGAGGGCACUCGACCUCGGGGUCGAGUGGUGAAGUGAAGUAGUGAUGUCCUCUACUCGACCUGGUGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUUUGGGUCGAGUGGUUUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY227642.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget |