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BaseInfo

ncRNA ID ath-miRf10585-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUACUCGACCUUUGGGUCGAGUGGU - NA
Stem-loop(if miRNA)   UG  GA          CAU         -A   GA     --UGAU      GAGGG         U G           -U  A  G A
GG  AA  CACUCGACCU   GGUCGAGUG  AGC  UCGAG      GGAGAC     CACUCGACC C GGGUCGAGUGG  GA GU A G
||  ||  ||||||||||   |||||||||  |||  |||||      ||||||     ||||||||| | |||||||||||  || || | U
CU  UU  GUGAGCUGGG   CCAGCUCAU  UCG  AGUUC      UCUCUG     GUGAGCUGG G UCCAGCUCAUC  CU UA U A
  GU  -G          UUU         CC   -A     UAGAGU      -----         U G           UC  G  G G
Stem-loop sequence GGUGAAGACACUCGACCUCAUGGUCGAGUGAAGCGAUCGAGUGAUGGAGACGAGGGCACUCGACCUCGGGGUCGAGUGGUGAAGUGAAGUAGUGAUGUCCUCUACUCGACCUGGUGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUUUGGGUCGAGUGGUUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:25   UGGUGAGCUGGGUUUCCAGCUCAUC   1
  |||||||||||||=|||||||||||
targets:762   ACCACUCGACCCAGAGGUCGAGUAG   786

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget