Search result

BaseInfo

ncRNA ID novel_bna_miR395
Species Brassica napus
Class miRNA
Genome position ChrC2:32503872-32503923 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600;SRR537609;SRR537612;SRR537633;SRR537657;SRR537857
Length 24
Mature sequence(if miRNA) 1 - AUUCCGACGAAUUUCUGACGAAUC - 24
Stem-loop(if miRNA) --A                     AG
   UCGUCAGAAAUUCGUCGGAAU  A
   |||||||||||||||||||||
   AGCAGUCUUUAAGCAGCCUUA  C
CUA                     GC
Stem-loop sequence AUCGUCAGAAAUUCGUCGGAAUAGACCGAUUCCGACGAAUUUCUGACGAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013828941.1
ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1
  |*||||||=|||*|||||||||||
targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340

2.5 PREDICTED: Brassica napus uncharacterized LOC106388794 (LOC106388794), mRNA uncharacterized LOC106388794(LOC106388794) coding protein psRNATarget
XM_013841268.1
ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1
  |*||||||=|||*|||||||||||
targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340

2.5 PREDICTED: Brassica napus uncharacterized LOC106400872 (LOC106400872), mRNA uncharacterized LOC106400872(LOC106400872) coding protein psRNATarget
XM_013820163.1
ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1
  |*||||||=|||*|||||||||||
targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340

2.5 PREDICTED: Brassica napus uncharacterized LOC106380410 (LOC106380410), mRNA uncharacterized LOC106380410(LOC106380410) coding protein psRNATarget
XM_013830859.1
ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1
  |*||||||=|||*|||||||||||
targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340

2.5 PREDICTED: Brassica napus uncharacterized LOC106390405 (LOC106390405), mRNA uncharacterized LOC106390405(LOC106390405) coding protein psRNATarget
XM_013815065.1
ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1
  |*||||||=|||*|||||||||||
targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340

2.5 PREDICTED: Brassica napus uncharacterized LOC106375204 (LOC106375204), mRNA uncharacterized LOC106375204(LOC106375204) coding protein psRNATarget