Search result

BaseInfo

ncRNA ID	novel_bna_miR394
Species	Brassica napus
Class	miRNA
Genome position	ChrC2:33505382-33505433 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537600;SRR537609;SRR537612;SRR537633;SRR537657
Length	24
Mature sequence(if miRNA)	1 - AUUCCGACGAAUUUCUGACGAAUC - 24
Stem-loop(if miRNA)	--A                     AG    UCGUCAGAAAUUCGUCGGAAU  A    |||||||||||||||||||||    AGCAGUCUUUAAGCAGCCUUA  C CUA                     GC
Stem-loop sequence	AUCGUCAGAAAUUCGUCGGAAUAGACCGAUUCCGACGAAUUUCUGACGAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013828941.1	ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1   |*||||||=|||*||||||||||| targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106388794 (LOC106388794), mRNA	uncharacterized LOC106388794(LOC106388794)	coding protein	psRNATarget
XM_013841268.1	ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1   |*||||||=|||*||||||||||| targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106400872 (LOC106400872), mRNA	uncharacterized LOC106400872(LOC106400872)	coding protein	psRNATarget
XM_013820163.1	ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1   |*||||||=|||*||||||||||| targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106380410 (LOC106380410), mRNA	uncharacterized LOC106380410(LOC106380410)	coding protein	psRNATarget
XM_013830859.1	ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1   |*||||||=|||*||||||||||| targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106390405 (LOC106390405), mRNA	uncharacterized LOC106390405(LOC106390405)	coding protein	psRNATarget
XM_013815065.1	ncRNA:24   CUAAGCAGUCUUUAAGCAGCCUUA   1   |*||||||=|||*||||||||||| targets:1317   GUUUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106375204 (LOC106375204), mRNA	uncharacterized LOC106375204(LOC106375204)	coding protein	psRNATarget