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BaseInfo

ncRNA ID novel_bna_miR390
Species Brassica napus
Class miRNA
Genome position ChrC1:32278317-32278493 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600
Length 25
Mature sequence(if miRNA) 1 - UUAGUAGACGACUUAUAAUUAAAUC - 25
Stem-loop(if miRNA) --        C             A      C                  A                           A   -A   UA
  UUAGUAGA GACUUAUAAUUAA UCGUCU GAAAGUCUUCCAGCUGGA GACUUAGUAGAAGACUUAUAAUUAAGU GUC  GGA  G
  |||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||  |||
  AAUCAUCU CUGAAUAUUAAUU AGCAGA CUUUCAGAAGGUCGACCU CUGAAUCAUCUUCUGAAUAUUAAUUCA CAG  UCU  U
UG        U             C      C                  A                           G   AC   UC
Stem-loop sequence UUAGUAGACGACUUAUAAUUAAAUCGUCUCGAAAGUCUUCCAGCUGGAAGACUUAGUAGAAGACUUAUAAUUAAGUAGUCAGGAUAGUCUUCUCAGACGACUUAAUUAUAAGUCUUCUACUAAGUCAUCCAGCUGGAAGACUUUCCAGACGACUUAAUUAUAAGUCUUCUACUAAGU