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BaseInfo

ncRNA ID	novel_bna_miR389
Species	Brassica napus
Class	miRNA
Genome position	ChrC1:14490924-14491105 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537600
Length	21
Mature sequence(if miRNA)	1 - UUGAAGACAAAAGUAAGAGCU - 21
Stem-loop(if miRNA)	--                 A      A                                   AAU                    CACACAU   UUGAAGACAAAAGUAAG GCUUCG UUACCUUGAGACCCACAAGCAUUGCAACUGUAGUC   GAGUCUUUGAACAAGAUGAA       G   ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||       A   AACUUCUGUUUUCAUUC CGAAGC AAUGGAACUCUGGGUGUUCGUAACGUUGACAUCAG   CUCAGAAACUUGUUCUACUU       A GU                 C      C                                   ---                    CAACUAC
Stem-loop sequence	UUGAAGACAAAAGUAAGAGCUUCGAUUACCUUGAGACCCACAAGCAUUGCAACUGUAGUCAAUGAGUCUUUGAACAAGAUGAACACACAUGAACAUCAACUUCAUCUUGUUCAAAGACUCGACUACAGUUGCAAUGCUUGUGGGUCUCAAGGUAACCGAAGCCCUUACUUUUGUCUUCAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013794813.1	ncRNA:21   UCGAGAAUGAAAACAGAAGUU   1   =||||*||||||||||*|||| targets:4980   GGCUCGUACUUUUGUCCUCAA   5000 Target Full Sequence	2.5	PREDICTED: Brassica napus nuclear-pore anchor (LOC106354776), mRNA	nuclear-pore anchor(LOC106354776)	coding protein	psRNATarget