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BaseInfo

ncRNA ID novel_bna_miR387
Species Brassica napus
Class miRNA
Genome position ChrC1:11954072-11954243 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600
Length 21
Mature sequence(if miRNA) 1 - AUACAUUGGAGCAUUUUCAGC - 21
Stem-loop(if miRNA) --                                 A           A                 AUAUGA     -CUA      A
  UGAAAAUGCUCCAAUGUAUGUCUCUAUAAUAGA UUCUUCUAUUU UAGGGGAAAAUAUAGAG      UAUUU    CCUCUA A
  ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||      |||||    ||||||
  ACUUUUACGAGGUUACAUACGGAGAUAUUAUCU AAGGAGAUAAA AUCUCCUUUUAUAUCUC      AUAAA    GGAGAU U
CG                                 C           -                 CUUUUA     AAAC      A
Stem-loop sequence UGAAAAUGCUCCAAUGUAUGUCUCUAUAAUAGAAUUCUUCUAUUUAUAGGGGAAAAUAUAGAGAUAUGAUAUUUCUACCUCUAAAUAUAGAGGCAAAAAAUAAUUUUCCUCUAUAUUUUCCUCUAAAAUAGAGGAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUUUCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013883548.1
ncRNA:21   CGACUUUUACGAGGUUACAUA   1
  *|||*||||||||||||*|||
targets:1726   ACUGCAAAUGCUCCAAUAUAU   1746

2.5 PREDICTED: Brassica napus receptor-like protein 12 (LOC106441781), mRNA receptor-like protein 12(LOC106441781) coding protein psRNATarget