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BaseInfo

ncRNA ID ath-miRf10584-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGUUGCUCGAGUGGCUGCUCA - NA
Stem-loop(if miRNA)     ----   UG  A       UG    G    G    UG     G G
GGUC    GAG  GC GCUCGAG  ACUG UCGA UGGC  CUCGA U A
||||    |||  || |||||||  |||| |||| ||||  ||||| |
UCAG    CUC  CG UGAGCUC  UGGU AGCU GUCG  GAGCU G C
    UGAA   GU  G       GU    G    G    GU     G U
Stem-loop sequence GGUCGAGUGGCAGCUCGAGUGACUGGUCGAGUGGCUGCUCGAGUGACUGGUCGAGUGGCUGGUCGAGUGGUUGCUCGAGUGGCUGCUCAAGUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY302080.1
ncRNA:21   ACUCGUCGGUGAGCUCGUUGG   1
  *|||*||||||||||||*|||
targets:828   CGAGAAGCCACUCGAGCUACC   848

2.5 Arabidopsis thaliana cinnamyl alcohol dehydrogenase-like protein (CAD8) mRNA, complete cds NA coding protein psRNATarget
AY129478.1
ncRNA:21   ACUCGUCGGUGAGCUCGUUGG   1
  *|||*||||||||||||*|||
targets:828   CGAGAAGCCACUCGAGCUACC   848

2.5 Arabidopsis thaliana AT4g37990/F20D10_110 mRNA, complete cds NA coding protein psRNATarget
X67815.1
ncRNA:21   ACUCGUCGGUGAGCUCGUUGG   1
  *|||*||||||||||||*|||
targets:873   CGAGAAGCCACUCGAGCUACC   893

2.5 A.thaliana mRNA for Eli3-2 NA coding protein psRNATarget
AF361859.1
ncRNA:21   ACUCGUCGGUGAGCUCGUUGG   1
  *|||*||||||||||||*|||
targets:900   CGAGAAGCCACUCGAGCUACC   920

2.5 Arabidopsis thaliana AT4g37990/F20D10_110 mRNA, complete cds NA coding protein psRNATarget
NM_119960.3
ncRNA:21   ACUCGUCGGUGAGCUCGUUGG   1
  *|||*||||||||||||*|||
targets:1155   CGAGAAGCCACUCGAGCUACC   1175

2.5 Arabidopsis thaliana cinnamyl alcohol dehydrogenase 8 (ELI3-2), mRNA cinnamyl alcohol dehydrogenase 8(ELI3-2) coding protein psRNATarget