ncRNA ID | novel_bna_miR381 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA8:2767862-2768033 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537600;SRR537604;SRR537609;SRR537612;SRR537857;SRR538067 |
Length | 27 |
Mature sequence(if miRNA) | 146 - AGAGGCAUACAUUGGAGCAUUUUCAUC - 172 |
Stem-loop(if miRNA) |
--                   A    A           CA       A                 AUAU       -CCA      A   UGAAAAUGCUCCAAUGUAU CCUC AUAAUAGAGUU  UCUAUUU UAGAGGAAAAUAUAGAG    GUUAUUU    CCUCUA A   ||||||||||||||||||| |||| |||||||||||  ||||||| |||||||||||||||||    |||||||    ||||||   ACUUUUACGAGGUUACAUA GGAG UAUUAUCUCAA  AGAUAAA AUCUCUUUUUAUAUCUC    UAAUAAA    GGAGAU U CU                   C    A           AG       -                 CUUU       AAAC      A |
Stem-loop sequence | UGAAAAUGCUCCAAUGUAUACCUCAAUAAUAGAGUUCAUCUAUUUAUAGAGGAAAAUAUAGAGAUAUGUUAUUUCCACCUCUAAAUAUAGAGGCAAAAAAUAAUUUUCCUCUAUAUUUUUCUCUAAAAUAGAGAAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUUUCAUC |