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BaseInfo

ncRNA ID novel_bna_miR381
Species Brassica napus
Class miRNA
Genome position ChrA8:2767862-2768033 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600;SRR537604;SRR537609;SRR537612;SRR537857;SRR538067
Length 27
Mature sequence(if miRNA) 146 - AGAGGCAUACAUUGGAGCAUUUUCAUC - 172
Stem-loop(if miRNA) --                   A    A           CA       A                 AUAU       -CCA      A
  UGAAAAUGCUCCAAUGUAU CCUC AUAAUAGAGUU  UCUAUUU UAGAGGAAAAUAUAGAG    GUUAUUU    CCUCUA A
  ||||||||||||||||||| |||| |||||||||||  ||||||| |||||||||||||||||    |||||||    ||||||
  ACUUUUACGAGGUUACAUA GGAG UAUUAUCUCAA  AGAUAAA AUCUCUUUUUAUAUCUC    UAAUAAA    GGAGAU U
CU                   C    A           AG       -                 CUUU       AAAC      A
Stem-loop sequence UGAAAAUGCUCCAAUGUAUACCUCAAUAAUAGAGUUCAUCUAUUUAUAGAGGAAAAUAUAGAGAUAUGUUAUUUCCACCUCUAAAUAUAGAGGCAAAAAAUAAUUUUCCUCUAUAUUUUUCUCUAAAAUAGAGAAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUUUCAUC