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BaseInfo

ncRNA ID novel_bna_miR380
Species Brassica napus
Class miRNA
Genome position ChrA8:1014559-1014756 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600
Length 27
Mature sequence(if miRNA) 1 - UUUAACUAAGAAAAGCUAAGAACCAUC - 27
Stem-loop(if miRNA) --                        A                                  G                          ----A     UAA
  UUUAACUAAGAAAAGCUAAGAACC UCUCUUAAAUAAGAGAUAUAAGAGUCGUCUCUUA CCGAAAAGUGUAAAAAAAACAAAAAA     AAAUU   C
  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     |||||
  AAAUUGAUUCUUUUCGAUUCUUGG AGAGAAUUUAUUCUCUAUAUUCUCGGCAGAGAAU GGCUUUUCACAUUUUUUUUGUUUUUU     UUUAG   U
UA                        C                                  G                          CACAA     UAC
Stem-loop sequence UUUAACUAAGAAAAGCUAAGAACCAUCUCUUAAAUAAGAGAUAUAAGAGUCGUCUCUUAGCCGAAAAGUGUAAAAAAAACAAAAAAAAAAUUUAACUCAUGAUUUAACACUUUUUUGUUUUUUUUACACUUUUCGGGUAAGAGACGGCUCUUAUAUCUCUUAUUUAAGAGACGGUUCUUAGCUUUUCUUAGUUAAAAU