ncRNA ID | novel_bna_miR380 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA8:1014559-1014756 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537600 |
Length | 27 |
Mature sequence(if miRNA) | 1 - UUUAACUAAGAAAAGCUAAGAACCAUC - 27 |
Stem-loop(if miRNA) |
--                        A                                  G                          ----A     UAA   UUUAACUAAGAAAAGCUAAGAACC UCUCUUAAAUAAGAGAUAUAAGAGUCGUCUCUUA CCGAAAAGUGUAAAAAAAACAAAAAA     AAAUU   C   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     |||||   AAAUUGAUUCUUUUCGAUUCUUGG AGAGAAUUUAUUCUCUAUAUUCUCGGCAGAGAAU GGCUUUUCACAUUUUUUUUGUUUUUU     UUUAG   U UA                        C                                  G                          CACAA     UAC |
Stem-loop sequence | UUUAACUAAGAAAAGCUAAGAACCAUCUCUUAAAUAAGAGAUAUAAGAGUCGUCUCUUAGCCGAAAAGUGUAAAAAAAACAAAAAAAAAAUUUAACUCAUGAUUUAACACUUUUUUGUUUUUUUUACACUUUUCGGGUAAGAGACGGCUCUUAUAUCUCUUAUUUAAGAGACGGUUCUUAGCUUUUCUUAGUUAAAAU |