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BaseInfo

ncRNA ID novel_bna_miR379
Species Brassica napus
Class miRNA
Genome position ChrA8:4034017-4034180 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600
Length 27
Mature sequence(if miRNA) 1 - UUAAAUUCGUUGAGAUCUCUAUAGAUC - 27
Stem-loop(if miRNA) --                A   A     A               U     C                 UGAUACUAU       AGC
  UCUAUAGAGAUCUCAA GAA UUUAA AAGACAUUGAUUUUA GCAUU AAAGAUUAAAUAAGAUC         CUUGUGU   G
  |||||||||||||||| ||| ||||| ||||||||||||||| ||||| |||||||||||||||||         |||||||
  AGAUAUCUCUAGAGUU CUU AAAUU UUUUGUAACUAGAAU CGUAA UUUCUGAUUUAUUCUAG         GAACACA   G
CU                G   -     C               U     A                 ---------       AUA
Stem-loop sequence UCUAUAGAGAUCUCAAAGAAAUUUAAAAAGACAUUGAUUUUAUGCAUUCAAAGAUUAAAUAAGAUCUGAUACUAUCUUGUGUAGCGGAUAACACAAGGAUCUUAUUUAGUCUUUAAAUGCUUAAGAUCAAUGUUUUCUUAAAUUCGUUGAGAUCUCUAUAGAUC