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BaseInfo

ncRNA ID novel_bna_miR378
Species Brassica napus
Class miRNA
Genome position ChrA7:39473885-39474016 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600
Length 27
Mature sequence(if miRNA) 106 - AGGCUAAGAACUCCAACCCGAGAGAUC - 132
Stem-loop(if miRNA) --     UA            -   G        A        -  UUAGUUUUUAACUAAAAAAAC
  UCUCU  GGUUGGGGUUCU AGC UAAUAUAA AUACGGUU UC                     U
  |||||  |||||||||||| ||| |||||||| |||||||| ||
  AGAGA  CCAACCUCAAGA UCG AUUAUAUU UAUGUUAG GA                     A
CU     GC            A   G        C        A  AUAGAAAAUCAAAAAAAGAGA
Stem-loop sequence UCUCUUAGGUUGGGGUUCUAGCGUAAUAUAAAAUACGGUUUCUUAGUUUUUAACUAAAAAAACUAAGAGAAAAAAACUAAAAGAUAAGAGAUUGUAUCUUAUAUUAGGCUAAGAACUCCAACCCGAGAGAUC