ncRNA ID | novel_bna_miR377 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA1:42799520-42799745 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537600;SRR537602;SRR537604;SRR537609;SRR537612;SRR538066;SRR538067 |
Length | 27 |
Mature sequence(if miRNA) | 1 - AUUAAGGACCCAAGAACAAGGACCAUC - 27 |
Stem-loop(if miRNA) |
--                          C              A                                                                    A   UGGUCCUUGUUCUUGGGUCCUUAAUA ACAUAUAUUUGUAU UAUCUAUUAUAUAUGCGUAUAUAAUUGUGAGCUAAGGACUUUACGGAAACCCAAACGGAAAGUUCCUU A   |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ACCAGGAACAAGAACCCAGGAAUUAU UGUAUAUAAACAUA AUAGAUAAUAUAUACGCAUAUAUUAACACUCGAUUCCUGAAAUGCCUUUGGGUUUGCCUUUCAAGGAA U CU                          A              C                                                                    U |
Stem-loop sequence | UGGUCCUUGUUCUUGGGUCCUUAAUACACAUAUAUUUGUAUAUAUCUAUUAUAUAUGCGUAUAUAAUUGUGAGCUAAGGACUUUACGGAAACCCAAACGGAAAGUUCCUUAAUUAAGGAACUUUCCGUUUGGGUUUCCGUAAAGUCCUUAGCUCACAAUUAUAUACGCAUAUAUAAUAGAUACAUACAAAUAUAUGUAUAUUAAGGACCCAAGAACAAGGACCAUC |