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BaseInfo

ncRNA ID novel_bna_miR374
Species Brassica napus
Class miRNA
Genome position ChrA9:19883882-19883933 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 23
Mature sequence(if miRNA) 1 - UUAGGGUUUAGAGUUUAGGGUUA - 23
Stem-loop(if miRNA) ----------A  -   G           U
           UC AAG UCUAGACUUUA G
           || ||| ||||||||||| G
           AG UUU GGAUUUGGGAU U
AUUGGGAUUUG  A   G           U
Stem-loop sequence AUCAAGGUCUAGACUUUAUGGUUUAGGGUUUAGGGUUUAGAGUUUAGGGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013833352.1
ncRNA:23   AUUGGGAUUUGAGAUUUGGGAUU   1
  *||=|*|||||*|||||||||||
targets:233   AAAUCGUAAACCCUAAACCCUAA   255

2.5 PREDICTED: Brassica napus protein RALF-like 9 (LOC106392544), mRNA protein RALF-like 9(LOC106392544) coding protein psRNATarget