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BaseInfo

ncRNA ID novel_bna_miR372
Species Brassica napus
Class miRNA
Genome position ChrA6:8596346-8596478 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537600;SRR537604;SRR537605;SRR537609;SRR537657;SRR537857;SRR538067
Length 23
Mature sequence(if miRNA) 111 - AGCGGAAUAUAAGAACAUGUCUC - 133
Stem-loop(if miRNA) --                A                                    G        CA
  AGCGGAAUAUAAGAAC UGUCUCUUAACUUUUAACUAAAAAAACUAAGAACCG CUCUUAAA  A
  |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  G
  UCGCCUUAUAUUCUUG GCAGAGAAUUGAAAAUUGAUUUUUUUGAUUCUUGGC GAGAAUUU  A
AA                G                                    A        UG
Stem-loop sequence AGCGGAAUAUAAGAACAUGUCUCUUAACUUUUAACUAAAAAAACUAAGAACCGGCUCUUAAACAAGAGUUUUAAGAGACGGUUCUUAGUUUUUUUAGUUAAAAGUUAAGAGACGGGUUCUUAUAUUCCGCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013810588.1
ncRNA:23   CUCUGUACAAGAAUAUAAGGCGA   1
  *||||=*|||||||||||||||*
targets:1249   AAGACGAGUUCUUAUAUUCCGCC   1271

3.0 PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA putative auxin efflux carrier component 8(LOC106370582) coding protein psRNATarget