ncRNA ID | ath-miRf10582-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CCUCGCAAACUUUGCGAGGGA - NA |
Stem-loop(if miRNA) |
GGUC    U           A           A   -AU U UC   --AAC  CUUGCAAUUUGCAAGGGAA     GUAA UCUCUCGCAAA UUUGCGAGGAA UAG   G C  GCU     CU                   A     |||| ||||||||||| ||||||||||| |||   | |  |||     ||     CGUU AGGGAGCGUUU AAACGCUCCUU AUC   C G  CGA     CG                   U CUAA    U           C           A   CCU U -U   GUAAA  CCACUUAAACGCUGCAAAA |
Stem-loop sequence | GGUCGUAAUUCUCUCGCAAAAUUUGCGAGGAAAUAGAUGUCUCGCUAACCUCUUGCAAUUUGCAAGGGAAAUAAAACGUCGCAAAUUCACCGCAAAUGAGCUGUCUCCCUAAUUCCUCGCAAACUUUGCGAGGGAUUUGCAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK230032.1 |
|
2.0 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-57-N05 | NA | coding protein | psRNATarget | |||||||||
AK230032.1 |
|
2.5 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-57-N05 | NA | coding protein | psRNATarget | |||||||||
NM_115111.5 |
|
2.5 | Arabidopsis thaliana F-box associated ubiquitination effector family protein partial mRNA | F-box associated ubiquitination effector family protein(AT3G52510) | coding protein | psRNATarget | |||||||||
NM_001339575.1 |
|
2.5 | Arabidopsis thaliana F-box associated ubiquitination effector family protein partial mRNA | F-box associated ubiquitination effector family protein(AT3G52510) | coding protein | psRNATarget |