| ncRNA ID | novel_bna_miR365 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA1:17694947-17695176 [-] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363495;SRR1363496 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGAAUAUGUAACUUUAAGGAACGG - 24 |
| Stem-loop(if miRNA) |
--C A AAUUUUUCACAC U CA AAA A UU UU U UU CAUA U C AAA AAC UUCCUUAAA UUACAUAUUCUA GUUUUAA AAAA CAUU UUUACAU UUUU UGUA UAUCUU UU C AUU UAAGC AAU AAUUC U ||||||||| |||||||||||| ||||||| |||| |||| ||||||| |||| |||| |||||| || | ||| ||||| ||| ||||| AAGGAAUUU AAUGUAUAAGAU CAAAGUU UUUU GUAA AAAUGUA AAAA ACAU AUAGAA AA G UAA GUUUG UUA UUAAG A GGC C CUUUUUUUUAAA U AG --A - UU -- U UU AUUA C A -AA AUG |
| Stem-loop sequence | CUUCCUUAAAAUUACAUAUUCUAAAUUUUUCACACGUUUUAAUAAAACACAUUAAAUUUACAUAUUUUUUUGUAUUUAUCUUUUUUUCCAUAAUUUUAAGCCAAUAAAAAUUCAACUAGUAGAAUUAAAUUAGUUUGCAAUAUUAGUUAAUAAGAUAUACAUUAAAAAUGUAAAAAAUGGAUUUUUUUGAAACAAAUUUUUUUUCUAGAAUAUGUAACUUUAAGGAACGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013828629.1 |
|
1.0 | PREDICTED: Brassica napus plant UBX domain-containing protein 10-like (LOC106388539), mRNA | plant UBX domain-containing protein 10-like(LOC106388539) | coding protein | psRNATarget | |||||||||
| XM_013863579.1 |
|
3.0 | PREDICTED: Brassica napus calcium-binding mitochondrial carrier protein SCaMC-1-like (LOC106422784), mRNA | calcium-binding mitochondrial carrier protein SCaMC-1-like(LOC106422784) | coding protein | psRNATarget |