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BaseInfo

ncRNA ID novel_bna_miR359
Species Brassica napus
Class miRNA
Genome position ChrA9:28412037-28412131 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 23
Mature sequence(if miRNA) 73 - UAGGAUUUAGAAUUUAGGGUUUA - 95
Stem-loop(if miRNA) --   GA          A   U     G  -AAU     AG G   AG
  UAG  UUUAGAAUUU GGG UUAUG UU    GAUUU  G UUU  A
  |||  |||||||||| ||| ||||| ||    |||||  | |||  G
  AUC  AAAUUUUAAA CUU AGUAU GG    UUGGG  U GGA  U
AA   AA          -   U     G  GGUU     AG G   AU
Stem-loop sequence UAGGAUUUAGAAUUUAGGGUUUAUGGUUAAUGAUUUAGGGUUUAGAGUUAAGGGUGAGGGUUUUGGGGGUAUGAUUUCAAAUUUUAAAAACUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013819934.1
ncRNA:23   AUUUGGGAUUUAAGAUUUAGGAU   1
  **|||||||||*||||||||||*
targets:67   ACAACCCUAAACUCUAAAUCCUC   89

2.5 PREDICTED: Brassica napus ethylene-responsive transcription factor ERF114-like (LOC106380120), mRNA ethylene-responsive transcription factor ERF114-like(LOC106380120) coding protein psRNATarget