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BaseInfo

ncRNA ID	novel_bna_miR349
Species	Brassica napus
Class	miRNA
Genome position	ChrC8:34790572-34790678 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527236
Length	24
Mature sequence(if miRNA)	1 - AACCCGUCUCUUAACUUUCAACUA - 24
Stem-loop(if miRNA)	--AACC              C          G        C  C        U       CGUCUCUUAACUUU AACUAAAAAA UUAAGAGC GG UCUUAAAU U       |||||||||||||| |||||||||| |||||||| || |||||||| C       GCAGAGAAUUGAAA UUGAUUUUUU GAUUCUCG CC AGAAUUUA U UCUUAA              A          A        A  A        U
Stem-loop sequence	AACCCGUCUCUUAACUUUCAACUAAAAAAGUUAAGAGCCGGCUCUUAAAUUUCUUAUUUAAGAACCAGCUCUUAGAUUUUUUAGUUAAAAGUUAAGAGACGAAUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013830748.1	ncRNA:24   AUCAACUUUCAAUUCUCUGCCCAA   1   |||||*|||||||||=|||||||| targets:8   UAGUUAAAAGUUAAGGGACGGGUU   31 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X2, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013830747.1	ncRNA:24   AUCAACUUUCAAUUCUCUGCCCAA   1   |||||*|||||||||=|||||||| targets:8   UAGUUAAAAGUUAAGGGACGGGUU   31 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X1, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013838168.1	ncRNA:24   AUCAACUUUCAAUUCUCUGCCCAA   1   |||||*|||||||||||||||*|| targets:631   UAGUUAAAAGUUAAGAGACGGAUU   654 Target Full Sequence	2.5	PREDICTED: Brassica napus heavy metal-associated isoprenylated plant protein 26-like (LOC106397566), transcript variant X1, mRNA	heavy metal-associated isoprenylated plant protein 26-like(LOC106397566)	coding protein	psRNATarget