ncRNA ID | novel_bna_miR343 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA1:32421239-32421420 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527236 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAUUAGAACAAAUCCACCUCUAU - 24 |
Stem-loop(if miRNA) |
--AA           CG C       A                         A              -C   --      A    C UC    A     AGGUGGAUUUG  C AAUGUAU CUUUUAUAAUAGAGUUCUUCUAUUU UAGAGGAAAAUAUA  AGA  UUUGCU UUUU A  UCUA A     |||||||||||  | ||||||| ||||||||||||||||||||||||| ||||||||||||||  |||  |||||| |||| |  ||||     UCCACCUAAAC  G UUACAUA GGAGAUAUUAUCUCAAGGAGAUAAA AUCUCUUUUUAUAU  UCU  GAAUGA AAAA U  AGAU U UAUC           AA A       C                         -              CU   UA      -    - GA    A |
Stem-loop sequence | AAAGGUGGAUUUGCGCCAAUGUAUACUUUUAUAAUAGAGUUCUUCUAUUUAUAGAGGAAAAUAUACAGAUUUGCUAUUUUCAUCUCUAAAUAUAGAAGUAAAAAGUAAGAUUCUUCUAUAUUUUUCUCUAAAAUAGAGGAACUCUAUUAUAGAGGCAUACAUUAGAACAAAUCCACCUCUAU |