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BaseInfo

ncRNA ID novel_bna_miR343
Species Brassica napus
Class miRNA
Genome position ChrA1:32421239-32421420 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527236
Length 24
Mature sequence(if miRNA) 1 - ACAUUAGAACAAAUCCACCUCUAU - 24
Stem-loop(if miRNA) --AA           CG C       A                         A              -C   --      A    C UC    A
    AGGUGGAUUUG  C AAUGUAU CUUUUAUAAUAGAGUUCUUCUAUUU UAGAGGAAAAUAUA  AGA  UUUGCU UUUU A  UCUA A
    |||||||||||  | ||||||| ||||||||||||||||||||||||| ||||||||||||||  |||  |||||| |||| |  ||||
    UCCACCUAAAC  G UUACAUA GGAGAUAUUAUCUCAAGGAGAUAAA AUCUCUUUUUAUAU  UCU  GAAUGA AAAA U  AGAU U
UAUC           AA A       C                         -              CU   UA      -    - GA    A
Stem-loop sequence AAAGGUGGAUUUGCGCCAAUGUAUACUUUUAUAAUAGAGUUCUUCUAUUUAUAGAGGAAAAUAUACAGAUUUGCUAUUUUCAUCUCUAAAUAUAGAAGUAAAAAGUAAGAUUCUUCUAUAUUUUUCUCUAAAAUAGAGGAACUCUAUUAUAGAGGCAUACAUUAGAACAAAUCCACCUCUAU