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BaseInfo

ncRNA ID	novel_bna_miR340
Species	Brassica napus
Class	miRNA
Genome position	ChrC4:1262069-1262188 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527236;SRR524726
Length	24
Mature sequence(if miRNA)	1 - AAACCCUUGGGUAAACCCUGAACC - 24
Stem-loop(if miRNA)	--                                                -GUUU   UU   AAACCCUUGGGUAAACCCUGAACCCUUGGAUAAAUCAUAAAUUCUAGG     AAU  U   ||||||||||||||||||||||||||||||||||||||||||||||||     |||  A   UUUGGGAACCUAUUUGGGACUUGGGAACCUAUUUAGUAUUUGAGAUUU     UUA  A GA                                                AGUUU   UA
Stem-loop sequence	AAACCCUUGGGUAAACCCUGAACCCUUGGAUAAAUCAUAAAUUCUAGGGUUUAAUUUUAAAUAUUUUUGAUUUAGAGUUUAUGAUUUAUCCAAGGGUUCAGGGUUUAUCCAAGGGUUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013845001.1	ncRNA:24   CCAAGUCCCAAAUGGGUUCCCAAA   1   *|||=*||||||=||||||||||| targets:1011   AGUUUCGGGUUUGCCCAAGGGUUU   1034 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106404272 (LOC106404272), mRNA	uncharacterized LOC106404272(LOC106404272)	coding protein	psRNATarget
XM_013846938.1	ncRNA:24   CCAAGUCCCAAAUGGGUUCCCAAA   1   *|||=*||||||=||||||||||| targets:1395   AGUUUCGGGUUUGCCCAAGGGUUU   1418 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106406309 (LOC106406309), mRNA	uncharacterized LOC106406309(BNAC06G03680D)	coding protein	psRNATarget